PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF099600030CFD_t1
Common NameTRAES_3BF099600030CFD_c1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 570aa    MW: 61710.1 Da    PI: 6.8836
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF099600030CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10257287434
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                              +k err+++NReAA++sR+RKka++++Le+ 
  TRAES3BF099600030CFD_t1 257 SKTERRLAQNREAAKKSRLRKKAYVQNLETS 287
                              799*************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-7254330IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.0E-7256300No hitNo description
PROSITE profilePS502179.289256300IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-7257301No hitNo description
PfamPF001703.8E-7258292IPR004827Basic-leucine zipper domain
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
PfamPF141449.6E-30339412IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MVQGEEASCS WRMASAAHDH HERAVLHLNH QAALAYHGGL QLQPHHHAAA APPAASFLDF  60
QPAAAAAAYF GELEEALIHG ANAGVSVADH LHHPHPGGMI AGDAQAKSAA AGGGGGYLAG  120
AGRPPTLEIF PSWPMPHPQQ LHSAGNSQSV GSTTDSSSAR NTMAQMELVS PGPAGSVRPS  180
PSSTTSEQQR QEVMMVTTDD YSHKPGLPPP AAAGLAAAAP SFQQPQHQHQ QLQLHGGGDH  240
DKRKHGSTRK DGKLVDSKTE RRLAQNREAA KKSRLRKKAY VQNLETSRVR LQQMEQELQR  300
ARSQGIFLGG GGAGGDMSPG AAMFDMEYAR WLDDDGKRLA ELRGGLQAHL ADSNLGAAVE  360
ECMQHYDELF QLKAELAHAD VFHLLTGAWA TPAERCFFWM GGFRPSELLK ILIGQLDPLT  420
EQQMMGICGL QHSSEQAEEA LAQGLQQLHQ SLADTVAAGT LNDGTPGPNY MAIMAIALEK  480
LASLESFYQQ ADNLRQQTLH QMRRILTTRQ AARCFLSIGE YYRRLRALSS LWASRPRENF  540
IGTESLSPTG TELQGMQQHH QPQQNQFSGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243220.0JX424322.1 Triticum urartu basic leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006645055.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415581e-118HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A077RTB00.0A0A077RTB0_WHEAT; Uncharacterized protein
STRINGMLOC_65998.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-112bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]